ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gyoB1 - ECOD Domain | ECOD

ECOD/Domains/e6gyoB1

e6gyoB1

UID: 002476667

PDB

Range: B:214-521
PDB: 6GYO chain B(all domains)
UniProt: Q9Y3Q4 (all domains)
Gene: HCN4

Molecule: Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4

3D Structure

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Related Domains

Browse other domains in Ion_trans,Ion_trans_N →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans,Ion_trans_N(5054.1.1.4)

Ligands

in contact, ≤ 4 Å

1,2-diacyl-sn-glycero-3-phosphoinositolPIE
drugDrugBank DB02144
1,2-Distearoyl-sn-glycerophosphoethanolamine3PE
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEPC1

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

PF08412Ion_trans_N

Ion transport protein N-terminal

External Links

ECOD PDB View: 6GYO RCSB PDB: 6GYO PDBe: 6GYO UniProt: Q9Y3Q4

Downloads

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Unknown atom or ionUNX

Shown in the structure viewer. Drug annotations from DrugDomain.