ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6omoJ1 - ECOD Domain | ECOD

ECOD/Domains/e6omoJ1

e6omoJ1

UID: 002485383

PDB

Range: J:36-139
PDB: 6OMO chain J(all domains)
UniProt: P22004 (all domains)
Gene: BMP6

Molecule: Bone morphogenetic protein 6

3D Structure

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Related Domains

Browse other domains in TGF_beta →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCystine-knot cytokines(385)

HH-groupCystine-knot cytokines(385.1)

TT-groupCystine-knot cytokines(385.1.1)

FFamilyTGF_beta(385.1.1.2)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

+ 2 additives (Isopropyl alcohol, DI(HYDROXYETHYL)ETHER)

Isopropyl alcoholIPA
DrugBank DB02325

Pfam Families

PF00019TGF_beta

Transforming growth factor beta like domain

ClanCL0079Cystine-knot

External Links

ECOD PDB View: 6OMO RCSB PDB: 6OMO PDBe: 6OMO UniProt: P22004

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.