ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6dmfD1 - ECOD Domain | ECOD

ECOD/Domains/e6dmfD1

e6dmfD1

UID: 002492074

PDB

Range: D:40-558
PDB: 6DMF chain D(all domains)
UniProt: A7LY27 (all domains)

Molecule: mixed-linkage glucan utilization locus (MLGUL) SGBP-B

3D Structure

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Related Domains

Browse other domains in SusD-like, SusD-like_2 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilySusD-like, SusD-like_2(109.4.1.1309)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 3 additives (Acetate, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

AcetateACT
DrugBank DB14511
1,2-ETHANEDIOL

Pfam Families

PF12741SusD-like

Susd and RagB outer membrane lipoprotein

ClanCL0020TPR

PF12771SusD-like_2

Starch-binding associating with outer membrane

ClanCL0020TPR

External Links

ECOD PDB View: 6DMF RCSB PDB: 6DMF PDBe: 6DMF UniProt: A7LY27

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.