ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6o64D2 - ECOD Domain | ECOD

ECOD/Domains/e6o64D2

e6o64D2

UID: 002496610

PDB

Range: D:49-105
PDB: 6O64 chain D(all domains)
UniProt: O48661 (all domains)
Gene: SPDSYN2

Molecule: Spermidine synthase 2

3D Structure

Loading viewer...

Related Domains

Browse other domains in Spermine_synt_N →

Classification

AArchitecturebeta meanders(a.2)

XX-groupSpermidine synthase tetramerisation domain(3699)

HH-groupSpermidine synthase tetramerisation domain(3699.1)

TT-groupSpermidine synthase tetramerisation domain(3699.1.1)

FFamilySpermine_synt_N(3699.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17284Spermine_synt_N

Spermidine synthase tetramerisation domain

External Links

ECOD PDB View: 6O64 RCSB PDB: 6O64 PDBe: 6O64 UniProt: O48661

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure