ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6nngB1 - ECOD Domain | ECOD

ECOD/Domains/e6nngB1

e6nngB1

UID: 002515008

PDB

Range: B:2-243
PDB: 6NNG chain B(all domains)
UniProt: P02554 (all domains)

Molecule: Tubulin beta-2B chain

3D Structure

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Related Domains

Browse other domains in Tubulin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupTubulin nucleotide-binding domain-like(2003.1.6)

FFamilyTubulin(2003.1.6.1)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
2-(1H-indol-6-yl)-4-(3,4,5-trimethoxyphenyl)-1H-imidazo[4,5-c]pyridineDJ9
Magnesium ionMG

Pfam Families

PF00091Tubulin

Tubulin/FtsZ family, GTPase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6NNG RCSB PDB: 6NNG PDBe: 6NNG UniProt: P02554

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (2-(N-MORPHOLINO)-ETHANESULFONIC ACID)

2-(N-MORPHOLINO)-ETHANESULFONIC ACIDMES

Shown in the structure viewer. Drug annotations from DrugDomain.