ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6h30A4 - ECOD Domain | ECOD

ECOD/Domains/e6h30A4

e6h30A4

UID: 002523913

PDB

Range: A:28-114,A:443-483
PDB: 6H30 chain A(all domains)
UniProt: Q9CES5 (all domains)
Gene: glnP

Molecule: Glutamine ABC transporter permease and substrate binding protein protein

3D Structure

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Related Domains

Browse other domains in SBP_bac_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_3(7523.1.1.4)

Ligands

in contact, ≤ 4 Å

2-(2-{2-[2-(2-{2-[2-(2-Ethoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethanol, Polyethyleneglycol Peg400PE5
drugDrugBank DB03556

+ 4 additives (2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, Tetraethylene glycol, …)

2-(N-MORPHOLINO)-ETHANESULFONIC ACIDMES
DI(HYDROXYETHYL)ETHER

Pfam Families

PF00497SBP_bac_3

Bacterial extracellular solute-binding proteins, family 3

ClanCL0177PBP

External Links

ECOD PDB View: 6H30 RCSB PDB: 6H30 PDBe: 6H30 UniProt: Q9CES5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Tetraethylene glycolPG4

Triethylene glycolPGE

Shown in the structure viewer. Drug annotations from DrugDomain.