ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6hnjA1 - ECOD Domain | ECOD

ECOD/Domains/e6hnjA1

e6hnjA1

UID: 002534449

PDB

Range: A:169-339
PDB: 6HNJ chain A(all domains)
UniProt: Q18A65 (all domains)
Gene: CD630_08730

Molecule: ABC-type transport system, sugar-family extracellular solute-binding protein

3D Structure

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Related Domains

Browse other domains in ABC_sub_bind →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyABC_sub_bind(2007.1.2.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Triethylene glycol, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

Triethylene glycolPGE
DrugBank DB02327
1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

PF04392ABC_sub_bind

ABC transporter substrate binding protein

ClanCL0144Periplas_BP

External Links

ECOD PDB View: 6HNJ RCSB PDB: 6HNJ PDBe: 6HNJ UniProt: Q18A65

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.