ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6u0zA1 - ECOD Domain | ECOD

ECOD/Domains/e6u0zA1

e6u0zA1

UID: 002538825

PDB

Range: A:23-288
PDB: 6U0Z chain A(all domains)
UniProt: B2FTM1 (all domains)
Gene: Smlt2667

Molecule: Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase)

3D Structure

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Related Domains

Browse other domains in Lactamase_B →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyLactamase_B(247.1.1.1)

Ligands

in contact, ≤ 4 Å

(2R,4S)-2-{(R)-carboxy[(phenylacetyl)amino]methyl}-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acidPNK
Zinc ionZN
metal

+ 2 additives (Sulfate ion, DI(HYDROXYETHYL)ETHER)

Sulfate ion

Pfam Families

PF00753Lactamase_B

Metallo-beta-lactamase superfamily

ClanCL0381Metallo-HOrase

External Links

ECOD PDB View: 6U0Z RCSB PDB: 6U0Z PDBe: 6U0Z UniProt: B2FTM1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.