ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rb7F1 - ECOD Domain | ECOD

ECOD/Domains/e6rb7F1

e6rb7F1

UID: 002540309

PDB

Range: F:1-305
PDB: 6RB7 chain F(all domains)
UniProt: A7B555 (all domains)
Gene: nanA

Molecule: Putative N-acetylneuraminate lyase

3D Structure

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Related Domains

Browse other domains in DHDPS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDHDPS(2002.1.1.29)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 3 additives (Glycerin, Tromethamine, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462
Tromethamine

Pfam Families

Dihydrodipicolinate synthetase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6RB7 RCSB PDB: 6RB7 PDBe: 6RB7 UniProt: A7B555

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03754

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.