ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6i34D2 - ECOD Domain | ECOD

ECOD/Domains/e6i34D2

e6i34D2

UID: 002553626

PDB

Range: D:822-1004
PDB: 6I34 chain D(all domains)
UniProt: P23378 (all domains)
Gene: GLDC

Molecule: Neanderthal Glycine decarboxylase

3D Structure

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Related Domains

Browse other domains in GcvP2_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilyGcvP2_C(3016.1.1.17)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114within 5 Å only

+ 2 additives (Glycerin, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF21478GcvP2_C

Glycine dehydrogenase, C-terminal domain

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 6I34 RCSB PDB: 6I34 PDBe: 6I34 UniProt: P23378

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.