ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6mgqB4 - ECOD Domain | ECOD

ECOD/Domains/e6mgqB4

e6mgqB4

UID: 002561541

PDB

Range: B:254-485,B:514-529
PDB: 6MGQ chain B(all domains)
UniProt: Q9NZ08 (all domains)
Gene: ERAP1

Molecule: Endoplasmic reticulum aminopeptidase 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_M1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M1(2498.1.1.9)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal
Unknown atom or ionUNX
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01433Peptidase_M1

Peptidase family M1 domain

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 6MGQ RCSB PDB: 6MGQ PDBe: 6MGQ UniProt: Q9NZ08

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure