ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6q3mA1 - ECOD Domain | ECOD

ECOD/Domains/e6q3mA1

e6q3mA1

UID: 002562046

PDB

Range: A:601-676
PDB: 6Q3M chain A(all domains)
UniProt: Q14839 (all domains)
Gene: CHD4

Molecule: Chromodomain-helicase-DNA-binding protein 4

3D Structure

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Related Domains

Browse other domains in Chromo →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupChromo domain-like(4.8)

TT-groupChromo domain-like(4.8.1)

FFamilyChromo(4.8.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Triethylene glycol, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

Triethylene glycolPGE
DrugBank DB02327
1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

Chromo (CHRromatin Organisation MOdifier) domain

ClanCL0010SH3

External Links

ECOD PDB View: 6Q3M RCSB PDB: 6Q3M PDBe: 6Q3M UniProt: Q14839

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.