ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6nkfC1 - ECOD Domain | ECOD

ECOD/Domains/e6nkfC1

e6nkfC1

UID: 002572664

PDB

Range: C:2-303
PDB: 6NKF chain C(all domains)

Molecule: Lip_vut4, C3L

3D Structure

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Related Domains

Browse other domains in Peptidase_S9,BD-FAE →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta-Hydrolases(7579)

HH-groupalpha/beta-Hydrolases(7579.1)

TT-groupalpha/beta-Hydrolases(7579.1.1)

FFamilyPeptidase_S9,BD-FAE(7579.1.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00326Peptidase_S9

Prolyl oligopeptidase family

ClanCL0028AB_hydrolase

BD-FAE

ClanCL0028AB_hydrolase

External Links

ECOD PDB View: 6NKF RCSB PDB: 6NKF PDBe: 6NKF

Downloads

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