ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vdbA2 - ECOD Domain | ECOD

ECOD/Domains/e6vdbA2

e6vdbA2

UID: 002574375

PDB

Range: A:1508-1547
PDB: 6VDB chain A(all domains)
UniProt: Q9BYW2 (all domains)
Gene: SETD2

Molecule: Histone-lysine N-methyltransferase SETD2

3D Structure

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Related Domains

Browse other domains in AWS →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupZn3Cys9 preSET domain-related(3358)

HH-groupZn3Cys9 preSET domain-related(3358.1)

TT-groupZn3Cys9 preSET domain-related(3358.1.1)

FFamilyAWS(3358.1.1.4)

Ligands

in contact, ≤ 4 Å

Thiocyanate ionSCN
Unknown atom or ionUNX
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

AWS domain

ClanCL0809CXC

External Links

ECOD PDB View: 6VDB RCSB PDB: 6VDB PDBe: 6VDB UniProt: Q9BYW2

Downloads

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