ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6tgsA1 - ECOD Domain | ECOD

ECOD/Domains/e6tgsA1

e6tgsA1

UID: 002580458

PDB

Range: A:5-92
PDB: 6TGS chain A(all domains)
UniProt: Q9SB64 (all domains)
Gene: NBR1

Molecule: Protein NBR1 homolog

3D Structure

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Related Domains

Browse other domains in PB1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyPB1(221.1.1.4)

Ligands

in contact, ≤ 4 Å

Succinic acidSIN
drugDrugBank DB00139
Chloride ionCL

+ 3 additives (Glycerin, Sulfate ion, DI(HYDROXYETHYL)ETHER)

GlycerinGOL

Pfam Families

PB1 domain

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 6TGS RCSB PDB: 6TGS PDBe: 6TGS UniProt: Q9SB64

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.