ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6i7sG3 - ECOD Domain | ECOD

ECOD/Domains/e6i7sG3

e6i7sG3

UID: 002581371

RepresentativePDB

Range: G:611-885
PDB: 6I7S chain G(all domains)
UniProt: P55157 (all domains)
Gene: MTTP

Molecule: Microsomal triglyceride transfer protein large subunit

3D Structure

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Related Domains

Browse other domains in MTP_lip_bd →

Classification

AArchitecturebeta meanders(a.2)

XX-groupLipovitellin-phosvitin complex(5087)

HH-groupLipovitellin LV-1C(5087.3)

TT-groupLipovitellin LV-1C(5087.3.1)

FFamilyMTP_lip_bd(5087.3.1.2)

Ligands

in contact, ≤ 4 Å

2-(2-{2-[2-(2-{2-[2-(2-Ethoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethanol, Polyethyleneglycol Peg400PE5
drugDrugBank DB03556

+ 4 additives (Triethylene glycol, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, …)

Triethylene glycolPGE

Pfam Families

PF19444MTP_lip_bd

MTP large subunit, lipid-binding domain

External Links

ECOD PDB View: 6I7S RCSB PDB: 6I7S PDBe: 6I7S UniProt: P55157

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB02327

1,2-ETHANEDIOLEDO

DI(HYDROXYETHYL)ETHERPEG

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.