ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6i7sH2 - ECOD Domain | ECOD

ECOD/Domains/e6i7sH2

e6i7sH2

UID: 002582183

PDB

Range: H:21-299
PDB: 6I7S chain H(all domains)
UniProt: P55157 (all domains)
Gene: MTTP

Molecule: Microsomal triglyceride transfer protein large subunit

3D Structure

Loading viewer...

Related Domains

Browse other domains in Vitellogenin_N →

Classification

AArchitecturebeta meanders(a.2)

XX-groupLipovitellin-phosvitin complex(5087)

HH-groupLipovitellin LV-1N(5087.2)

TT-groupLipovitellin LV-1N(5087.2.1)

FFamilyVitellogenin_N(5087.2.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (Triethylene glycol, 1,2-ETHANEDIOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, …)

Triethylene glycolPGE
DrugBank DB02327
1,2-ETHANEDIOLEDO
2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL

Pfam Families

PF29934Vitellogenin_N

Vitellogenin N-terminal domain

External Links

ECOD PDB View: 6I7S RCSB PDB: 6I7S PDBe: 6I7S UniProt: P55157

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.