ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6sxrA2 - ECOD Domain | ECOD

ECOD/Domains/e6sxrA2

e6sxrA2

UID: 002583844

PDB

Range: A:18-337
PDB: 6SXR chain A(all domains)
UniProt: Q8NK89 (all domains)
Gene: abfB

Molecule: Alpha-L-arabinofuranosidase B

3D Structure

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Related Domains

Browse other domains in ArabFuran-catal →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyArabFuran-catal(10.1.1.30)

Ligands

in contact, ≤ 4 Å

4-Nitrophenyl-AraKHP
drugDrugBank DB03196
N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 5 additives (Triethylene glycol, Pentaethylene glycol, Acetate ion, …)

Pfam Families

PF09206ArabFuran-catal

Alpha-L-arabinofuranosidase B, catalytic

ClanCL0004Concanavalin

External Links

ECOD PDB View: 6SXR RCSB PDB: 6SXR PDBe: 6SXR UniProt: Q8NK89

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Triethylene glycolPGE
DrugBank DB02327
Pentaethylene glycol1PE
Acetate ionACT
1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.