ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6sxtA1 - ECOD Domain | ECOD

ECOD/Domains/e6sxtA1

e6sxtA1

UID: 002583847

PDB

Range: A:338-498
PDB: 6SXT chain A(all domains)
UniProt: Q8NK89 (all domains)
Gene: abfB

Molecule: Alpha-L-arabinofuranosidase B

3D Structure

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Related Domains

Browse other domains in AbfB →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-Trefoil(6)

HH-groupbeta-Trefoil(6.1)

TT-groupbeta-Trefoil(6.1.1)

FFamilyAbfB(6.1.1.8)

Ligands

in contact, ≤ 4 Å

AlanineALA
drugDrugBank DB00160
N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 5 additives (Acetate, Sulfate ion, 1,2-ETHANEDIOL, …)

Pfam Families

Alpha-L-arabinofuranosidase B (ABFB) domain

ClanCL0066Trefoil

External Links

ECOD PDB View: 6SXT RCSB PDB: 6SXT PDBe: 6SXT UniProt: Q8NK89

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT
DrugBank DB14511
Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG
Triethylene glycolPGE

Shown in the structure viewer. Drug annotations from DrugDomain.