ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6sxtA2 - ECOD Domain | ECOD

ECOD/Domains/e6sxtA2

e6sxtA2

UID: 002583848

PDB

Range: A:17-337
PDB: 6SXT chain A(all domains)
UniProt: Q8NK89 (all domains)
Gene: abfB

Molecule: Alpha-L-arabinofuranosidase B

3D Structure

Loading viewer...

Related Domains

Browse other domains in ArabFuran-catal →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyArabFuran-catal(10.1.1.30)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
[(1~{S},2~{S},3~{S},4~{S})-2-(hydroxymethyl)-3,4-bis(oxidanyl)cyclopentyl]azaniumLXE

+ 5 additives (Triethylene glycol, Acetate ion, 1,2-ETHANEDIOL, …)

Pfam Families

PF09206ArabFuran-catal

Alpha-L-arabinofuranosidase B, catalytic

ClanCL0004Concanavalin

External Links

ECOD PDB View: 6SXT RCSB PDB: 6SXT PDBe: 6SXT UniProt: Q8NK89

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Triethylene glycolPGE

DrugBank DB02327

Acetate ionACT

1,2-ETHANEDIOLEDO

DI(HYDROXYETHYL)ETHERPEG

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.