ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6siuB1 - ECOD Domain | ECOD

ECOD/Domains/e6siuB1

e6siuB1

UID: 002597030

PDB

Range: B:3488-3784
PDB: 6SIU chain B(all domains)
UniProt: Q06277 (all domains)
Gene: ibpA

Molecule: Protein adenylyltransferase and cysteine protease IbpA

3D Structure

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Related Domains

Browse other domains in Fic →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFic-like(4040)

HH-groupFic-like(4040.1)

TT-groupFic-like(4040.1.1)

FFamilyFic(4040.1.1.1)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
[(2~{R},3~{S},4~{R},5~{R})-5-[4-(acetamidomethyl)-1,2,3-triazol-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphateLJN

+ 2 additives (Glycerin, Sulfate ion)

Pfam Families

Fic/DOC family

External Links

ECOD PDB View: 6SIU RCSB PDB: 6SIU PDBe: 6SIU UniProt: Q06277

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.