ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vo6A1 - ECOD Domain | ECOD

ECOD/Domains/e6vo6A1

e6vo6A1

UID: 002605072

PDB

Range: A:2-312
PDB: 6VO6 chain A(all domains)
UniProt: Q0P8I7 (all domains)
Gene: Cj1427c

Molecule: Putative sugar-nucleotide epimerase/dehydratease

3D Structure

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Related Domains

Browse other domains in Epimerase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyEpimerase(2003.1.1.20)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
NADHNAI
drugDrugBank DB00157

Pfam Families

PF01370Epimerase

NAD dependent epimerase/dehydratase family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6VO6 RCSB PDB: 6VO6 PDBe: 6VO6 UniProt: Q0P8I7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Tetramethylammonium

drugDrugBank DB03095

Chloride ionCL

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.