ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6va5A1 - ECOD Domain | ECOD

ECOD/Domains/e6va5A1

e6va5A1

UID: 002623936

PDB

Range: A:1484-1537
PDB: 6VA5 chain A(all domains)
UniProt: Q12888 (all domains)
Gene: TP53BP1

Molecule: TP53-binding protein 1

3D Structure

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Related Domains

Browse other domains in 53-BP1_Tudor →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamily53-BP1_Tudor(4.1.1.65)

Ligands

in contact, ≤ 4 Å

2-(4-methylpiperazin-1-yl)anilineQSS
Unknown atom or ionUNX

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL

Pfam Families

PF0903853-BP1_Tudor

Tumour suppressor p53-binding protein-1 Tudor

ClanCL0010SH3

External Links

ECOD PDB View: 6VA5 RCSB PDB: 6VA5 PDBe: 6VA5 UniProt: Q12888

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.