ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6khnB2 - ECOD Domain | ECOD

ECOD/Domains/e6khnB2

e6khnB2

UID: 002647141

PDB

Range: B:387-514
PDB: 6KHN chain B(all domains)
UniProt: Q6ZJK7 (all domains)
Gene: TDC1

Molecule: Tryptophan decarboxylase 1

3D Structure

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Related Domains

Browse other domains in Pyridoxal_deC →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilyPyridoxal_deC(3016.1.1.4)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00282Pyridoxal_deC

Pyridoxal-dependent decarboxylase conserved domain

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 6KHN RCSB PDB: 6KHN PDBe: 6KHN UniProt: Q6ZJK7

Downloads

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