ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6khoB1 - ECOD Domain | ECOD

ECOD/Domains/e6khoB1

e6khoB1

UID: 002647144

PDB

Range: B:387-514
PDB: 6KHO chain B(all domains)
UniProt: Q6ZJK7 (all domains)
Gene: TDC1

Molecule: Tryptophan decarboxylase 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pyridoxal_deC →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilyPyridoxal_deC(3016.1.1.4)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00282Pyridoxal_deC

Pyridoxal-dependent decarboxylase conserved domain

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 6KHO RCSB PDB: 6KHO PDBe: 6KHO UniProt: Q6ZJK7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure