ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6khpB2 - ECOD Domain | ECOD

ECOD/Domains/e6khpB2

e6khpB2

UID: 002647149

PDB

Range: B:21-386
PDB: 6KHP chain B(all domains)
UniProt: Q6ZJK7 (all domains)
Gene: TDC1

Molecule: Tryptophan decarboxylase 1

3D Structure

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Related Domains

Browse other domains in Pyridoxal_deC →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyPyridoxal_deC(7577.1.1.4)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
TryptamineTSS
drugDrugBank DB08653
Calcium ion

Pfam Families

PF00282Pyridoxal_deC

Pyridoxal-dependent decarboxylase conserved domain

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 6KHP RCSB PDB: 6KHP PDBe: 6KHP UniProt: Q6ZJK7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metalwithin 5 Å only

+ 2 additives (Acetate ion, DI(HYDROXYETHYL)ETHER)

Acetate ionACT
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.