ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6skhA1 - ECOD Domain | ECOD

ECOD/Domains/e6skhA1

e6skhA1

UID: 002651102

PDB

Range: A:592-750
PDB: 6SKH chain A(all domains)
UniProt: Q04609 (all domains)
Gene: FOLH1

Molecule: Glutamate carboxypeptidase 2

3D Structure

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Related Domains

Browse other domains in TFR_dimer →

Classification

AArchitecturealpha bundles(a.7)

XX-groupN-cbl like(611)

HH-groupTransferrin receptor ectodomain, C-terminal domain(611.1)

TT-groupTransferrin receptor ectodomain, C-terminal domain(611.1.1)

FFamilyTFR_dimer(611.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
(2~{S})-2-[[(2~{S})-1,4-bis(oxidanyl)-1,4-bis(oxidanylidene)butan-2-yl]sulfamoylamino]pentanedioic acidLHK
beta-D-mannopyranose

Pfam Families

PF04253TFR_dimer

Transferrin receptor-like dimerisation domain

External Links

ECOD PDB View: 6SKH RCSB PDB: 6SKH PDBe: 6SKH UniProt: Q04609

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

+ 3 additives (Glycerin, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462
1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.