ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6ybsV1 - ECOD Domain | ECOD

ECOD/Domains/e6ybsV1

e6ybsV1

UID: 002674601

PDB

Range: V:16-204
PDB: 6YBS chain V(all domains)
UniProt: P46782 (all domains)
Gene: RPS5

Molecule: 40S ribosomal protein S5

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S7 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRibosomal protein S7(167)

HH-groupRibosomal protein S7(167.1)

TT-groupRibosomal protein S7(167.1.1)

FFamilyRibosomal_S7(167.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00177Ribosomal_S7

Ribosomal protein S7p/S5e

External Links

ECOD PDB View: 6YBS RCSB PDB: 6YBS PDBe: 6YBS UniProt: P46782

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure