ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ybsk1 - ECOD Domain | ECOD

ECOD/Domains/e6ybsk1

e6ybsk1

UID: 002674602

PDB

Range: k:93-151
PDB: 6YBS chain k(all domains)
UniProt: P62979 (all domains)
Gene: RPS27A

Molecule: Ubiquitin-40S ribosomal protein S27a

3D Structure

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Related Domains

Browse other domains in Ribosomal_S27 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRibosomal_S27(375.1.1.11)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01599Ribosomal_S27

Ribosomal protein S27a

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 6YBS RCSB PDB: 6YBS PDBe: 6YBS UniProt: P62979

Downloads

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