ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6kzbC1 - ECOD Domain | ECOD

ECOD/Domains/e6kzbC1

e6kzbC1

UID: 002707142

PDB

Range: C:146-467
PDB: 6KZB chain C(all domains)
UniProt: P21980 (all domains)
Gene: TGM2

Molecule: Protein-glutamine gamma-glutamyltransferase 2

3D Structure

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Related Domains

Browse other domains in Transglut_core →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyTransglut_core(219.1.1.13)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01841Transglut_core

Transglutaminase-like superfamily

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 6KZB RCSB PDB: 6KZB PDBe: 6KZB UniProt: P21980

Downloads

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