ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6p24D1 - ECOD Domain | ECOD

ECOD/Domains/e6p24D1

e6p24D1

UID: 002710290

PDB

Range: D:689-794
PDB: 6P24 chain D(all domains)
UniProt: P07395 (all domains)
Gene: pheT

Molecule: Phenylalanine--tRNA ligase beta subunit

3D Structure

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Related Domains

Browse other domains in FDX-ACB →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAnticodon-binding domain of PheRS(304.18)

TT-groupAnticodon-binding domain of PheRS(304.18.1)

FFamilyFDX-ACB(304.18.1.1)

Ligands

in contact, ≤ 4 Å

HEXANE-1,6-DIOLHEZ
Magnesium ionMG
metal

+ 4 additives (Triethylene glycol, Tromethamine, 1,2-ETHANEDIOL, …)

Triethylene glycolPGE

Pfam Families

PF03147FDX-ACB

Ferredoxin-fold anticodon binding domain

External Links

ECOD PDB View: 6P24 RCSB PDB: 6P24 PDBe: 6P24 UniProt: P07395

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB02327

TromethamineTRS

DrugBank DB03754

1,2-ETHANEDIOLEDO

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.