ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ywzB1 - ECOD Domain | ECOD

ECOD/Domains/e6ywzB1

e6ywzB1

UID: 002718910

PDB

Range: B:651-759
PDB: 6YWZ chain B(all domains)
UniProt: Q9Y566 (all domains)
Gene: SHANK1

Molecule: SH3 and multiple ankyrin repeat domains protein 1

3D Structure

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Related Domains

Browse other domains in PDZ →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPDZ domain(7)

HH-groupPDZ domain(7.1)

TT-groupPDZ domain(7.1.1)

FFamilyPDZ(7.1.1.1)

Ligands

in contact, ≤ 4 Å

ArginineARG
drugDrugBank DB00125
LeucineLEU
drugDrugBank DB00149
Threonine

Pfam Families

PDZ domain

ClanCL0466PDZ-like

External Links

ECOD PDB View: 6YWZ RCSB PDB: 6YWZ PDBe: 6YWZ UniProt: Q9Y566

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB00156

2-[(~{E})-(4-oxidanylidenebutanoylhydrazinylidene)methyl]benzoic acidPWN

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.