ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6z5s31 - ECOD Domain | ECOD

ECOD/Domains/e6z5s31

e6z5s31

UID: 002719096

PDB

Range: 3:1-46
PDB: 6Z5S chain 3(all domains)
UniProt: Q6N9L4 (all domains)
Gene: pufA

Molecule: Light-harvesting complex 1 alpha chain

3D Structure

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Related Domains

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Classification

AArchitectureextended segments(a.20)

XX-groupBacterial light-harvesting complex subunits(5074)

HH-groupBacterial light-harvesting complex subunits(5074.1)

TT-groupBacterial light-harvesting complex subunits(5074.1.1)

FFamilyLHC(5074.1.1.1)

Ligands

in contact, ≤ 4 Å

Bacteriochlorophyll ABCL
drugDrugBank DB01853
Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429

Pfam Families

Antenna complex alpha/beta subunit

External Links

ECOD PDB View: 6Z5S RCSB PDB: 6Z5S PDBe: 6Z5S UniProt: Q6N9L4

Downloads

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Spirilloxanthin

Shown in the structure viewer. Drug annotations from DrugDomain.