ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6z81A2 - ECOD Domain | ECOD

ECOD/Domains/e6z81A2

e6z81A2

UID: 002719306

PDB

Range: A:126-342
PDB: 6Z81 chain A(all domains)
UniProt: P05852 (all domains)
Gene: tsaD

Molecule: tRNA N6-adenosine threonylcarbamoyltransferase

3D Structure

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Related Domains

Browse other domains in TsaD →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyTsaD(2484.1.1.10)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateAMP
drugDrugBank DB00131within 5 Å only
NICKEL (II) IONNI
metal
(2~{S},3~{R})-2-[2-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]ethanoylamino]-3-oxidanyl-butanoic acid

Pfam Families

tRNA N6-adenosine threonylcarbamoyltransferase

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 6Z81 RCSB PDB: 6Z81 PDBe: 6Z81 UniProt: P05852

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Zinc ionZN

metal

+ 3 additives (Acetate, Sulfate ion, DI(HYDROXYETHYL)ETHER)

AcetateACT
DrugBank DB14511
Sulfate ionSO4
DrugBank DB14546
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.