ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6z81C2 - ECOD Domain | ECOD

ECOD/Domains/e6z81C2

e6z81C2

UID: 002719310

PDB

Range: C:1-107
PDB: 6Z81 chain C(all domains)
UniProt: P76256 (all domains)
Gene: tsaB

Molecule: tRNA threonylcarbamoyladenosine biosynthesis protein TsaB

3D Structure

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Related Domains

Browse other domains in TsaD →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyTsaD(2484.1.1.10)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateAMP
drugDrugBank DB00131
Sodium ionNA
metal
NICKEL (II) IONNI

Pfam Families

tRNA N6-adenosine threonylcarbamoyltransferase

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 6Z81 RCSB PDB: 6Z81 PDBe: 6Z81 UniProt: P76256

Downloads

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metalwithin 5 Å only

+ 2 additives (Acetate ion, DI(HYDROXYETHYL)ETHER)

Acetate ionACT
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.