ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zgbC1 - ECOD Domain | ECOD

ECOD/Domains/e6zgbC1

e6zgbC1

UID: 002719642

PDB

Range: C:8-430
PDB: 6ZGB chain C(all domains)
UniProt: Q5JID0 (all domains)
Gene: TK0986

Molecule: Proton/glutamate symporter, SDF family

3D Structure

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Related Domains

Browse other domains in SDF →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupProton glutamate symport protein(5052)

HH-groupProton glutamate symport protein(5052.1)

TT-groupProton glutamate symport protein(5052.1.1)

FFamilySDF(5052.1.1.1)

Ligands

in contact, ≤ 4 Å

(2~{S},3~{S})-2-azanyl-3-[(2-nitrophenyl)methoxy]butanedioic acidQJW

+ 2 additives (Triethylene glycol, DI(HYDROXYETHYL)ETHER)

Triethylene glycolPGE
DrugBank DB02327
DI(HYDROXYETHYL)ETHER

Pfam Families

Sodium:dicarboxylate symporter family

External Links

ECOD PDB View: 6ZGB RCSB PDB: 6ZGB PDBe: 6ZGB UniProt: Q5JID0

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.