ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7c52H1 - ECOD Domain | ECOD

ECOD/Domains/e7c52H1

e7c52H1

UID: 002721458

PDB

Range: H:35-259
PDB: 7C52 chain H(all domains)
UniProt: D2Z0P9 (all domains)
Gene: puhA

Molecule: Photosynthetic reaction center H subunit

3D Structure

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Related Domains

Browse other domains in Photosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupPRC-barrel domain(4.6)

TT-groupPRC-barrel domain(4.6.1)

FFamilyPhotosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain(4.6.1.1)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolaminePEF
drugDrugBank DB01728

Pfam Families

Photosynthetic reaction centre, H-chain N-terminal region

ClanCL0350PRC-barrel

PRC-barrel domain

ClanCL0350PRC-barrel

External Links

ECOD PDB View: 7C52 RCSB PDB: 7C52 PDBe: 7C52 UniProt: D2Z0P9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATEPGV

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.