ECODEvolutionary Classification of Protein Domains

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PDB 7C52

X-RAY DIFFRACTION2.89 Å37 chains38 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 0LH1 beta polypeptideview chain

1 domain

e7c5201(0:4-46)

Chain 1LH1 alpha polypeptideview chain

1 domain

e7c5211(1:4-59)

Chain 2LH1 beta polypeptideview chain

1 domain

e7c5221(2:6-46)

Chain 3LH1 alpha polypeptideview chain

1 domain

e7c5231(3:4-59)

Chain 4LH1 beta polypeptideview chain

1 domain

e7c5241(4:5-46)

Chain 5LH1 alpha polypeptideview chain

1 domain

e7c5251(5:6-59)

Chain 6LH1 beta polypeptideview chain

1 domain

e7c5261(6:5-46)

Chain 7LH1 alpha polypeptideview chain

1 domain

e7c5271(7:3-59)

Chain 8LH1 beta polypeptideview chain

1 domain

e7c5281(8:6-46)

Chain 9LH1 alpha polypeptideview chain

1 domain

e7c5291(9:3-59)

Chain ALH1 alpha polypeptideview chain

1 domain

e7c52A1(A:6-59)

Chain bHigh-potential iron-sulfur proteinview chain

1 domain

e7c52b1(b:1-83)

Chain BLH1 beta polypeptideview chain

1 domain

e7c52B1(B:5-46)

Chain CPhotosynthetic reaction center cytochrome c subunitview chain

1 domain

e7c52C1(C:23-333)

Chain DLH1 alpha polypeptideview chain

1 domain

e7c52D1(D:5-59)

Chain ELH1 beta polypeptideview chain

1 domain

e7c52E1(E:9-46)

Chain FLH1 alpha polypeptideview chain

1 domain

e7c52F1(F:5-59)

Chain GLH1 beta polypeptideview chain

1 domain

e7c52G1(G:5-46)

Chain HPhotosynthetic reaction center H subunitview chain

2 domains

e7c52H1(H:35-259)e7c52H2(H:5-34)

Chain ILH1 alpha polypeptideview chain

1 domain

e7c52I1(I:3-59)

Chain JLH1 beta polypeptideview chain

1 domain

e7c52J1(J:5-46)

Chain KLH1 alpha polypeptideview chain

1 domain

e7c52K1(K:3-59)

Chain LPhotosynthetic reaction center L subunitview chain

1 domain

e7c52L1(L:2-281)

Chain MPhotosynthetic reaction center M subunitview chain

1 domain

e7c52M1(M:2-319)

Chain NLH1 beta polypeptideview chain

1 domain

e7c52N1(N:5-46)

Chain OLH1 alpha polypeptideview chain

1 domain

e7c52O1(O:4-59)

Chain PLH1 beta polypeptideview chain

1 domain

e7c52P1(P:5-46)

Chain QLH1 alpha polypeptideview chain

1 domain

e7c52Q1(Q:3-59)

Chain RLH1 beta polypeptideview chain

1 domain

e7c52R1(R:6-46)

Chain SLH1 alpha polypeptideview chain

1 domain

e7c52S1(S:3-58)

Chain TLH1 beta polypeptideview chain

1 domain

e7c52T1(T:4-46)

Chain ULH1 alpha polypeptideview chain

1 domain

e7c52U1(U:3-60)

Chain VLH1 beta polypeptideview chain

1 domain

e7c52V1(V:5-46)

Chain WLH1 alpha polypeptideview chain

1 domain

e7c52W1(W:5-60)

Chain XLH1 beta polypeptideview chain

1 domain

e7c52X1(X:6-46)

Chain YLH1 alpha polypeptideview chain

1 domain

e7c52Y1(Y:3-59)

Chain ZLH1 beta polypeptideview chain

1 domain

e7c52Z1(Z:7-46)

All Domains (38)

#	Chain	Domain ID	Range	Family	Classification
1	0	e7c5201	0:4-46	LHC	5074 → 5074.1 → 5074.1.1
2	1	e7c5211	1:4-59	LHC	5074 → 5074.1 → 5074.1.1
3	2	e7c5221	2:6-46	LHC	5074 → 5074.1 → 5074.1.1
4	3	e7c5231	3:4-59	LHC	5074 → 5074.1 → 5074.1.1
5	4	e7c5241	4:5-46	LHC	5074 → 5074.1 → 5074.1.1
6	5	e7c5251	5:6-59	LHC	5074 → 5074.1 → 5074.1.1
7	6	e7c5261	6:5-46	LHC	5074 → 5074.1 → 5074.1.1
8	7	e7c5271	7:3-59	LHC	5074 → 5074.1 → 5074.1.1
9	8	e7c5281	8:6-46	LHC	5074 → 5074.1 → 5074.1.1
10	9	e7c5291	9:3-59	LHC	5074 → 5074.1 → 5074.1.1
11	A	e7c52A1	A:6-59	LHC	5074 → 5074.1 → 5074.1.1
12	b	e7c52b1	b:1-83	HIPIP	374 → 374.1 → 374.1.1
13	B	e7c52B1	B:5-46	LHC	5074 → 5074.1 → 5074.1.1
14	C	e7c52C1	C:23-333	CytoC_RC	139 → 139.3 → 139.3.1
15	D	e7c52D1	D:5-59	LHC	5074 → 5074.1 → 5074.1.1
16	E	e7c52E1	E:9-46	LHC	5074 → 5074.1 → 5074.1.1
17	F	e7c52F1	F:5-59	LHC	5074 → 5074.1 → 5074.1.1
18	G	e7c52G1	G:5-46	LHC	5074 → 5074.1 → 5074.1.1
19	H	e7c52H1	H:35-259	Photosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain	4 → 4.6 → 4.6.1
20	H	e7c52H2	H:5-34	PRCH	5002 → 5002.1 → 5002.1.1
21	I	e7c52I1	I:3-59	LHC	5074 → 5074.1 → 5074.1.1
22	J	e7c52J1	J:5-46	LHC	5074 → 5074.1 → 5074.1.1
23	K	e7c52K1	K:3-59	LHC	5074 → 5074.1 → 5074.1.1
24	L	e7c52L1	L:2-281	Photo_RC	5037 → 5037.1 → 5037.1.1
25	M	e7c52M1	M:2-319	Photo_RC	5037 → 5037.1 → 5037.1.1
26	N	e7c52N1	N:5-46	LHC	5074 → 5074.1 → 5074.1.1
27	O	e7c52O1	O:4-59	LHC	5074 → 5074.1 → 5074.1.1
28	P	e7c52P1	P:5-46	LHC	5074 → 5074.1 → 5074.1.1
29	Q	e7c52Q1	Q:3-59	LHC	5074 → 5074.1 → 5074.1.1
30	R	e7c52R1	R:6-46	LHC	5074 → 5074.1 → 5074.1.1
31	S	e7c52S1	S:3-58	LHC	5074 → 5074.1 → 5074.1.1
32	T	e7c52T1	T:4-46	LHC	5074 → 5074.1 → 5074.1.1
33	U	e7c52U1	U:3-60	LHC	5074 → 5074.1 → 5074.1.1
34	V	e7c52V1	V:5-46	LHC	5074 → 5074.1 → 5074.1.1
35	W	e7c52W1	W:5-60	LHC	5074 → 5074.1 → 5074.1.1
36	X	e7c52X1	X:6-46	LHC	5074 → 5074.1 → 5074.1.1
37	Y	e7c52Y1	Y:3-59	LHC	5074 → 5074.1 → 5074.1.1
38	Z	e7c52Z1	Z:7-46	LHC	5074 → 5074.1 → 5074.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors