ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7c1bA1 - ECOD Domain | ECOD

ECOD/Domains/e7c1bA1

e7c1bA1

UID: 002721885

PDB

Range: A:3-101,A:245-369
PDB: 7C1B chain A(all domains)
UniProt: Q5SLB4 (all domains)
Gene: TTHA0379

Molecule: Sugar ABC transporter, periplasmic sugar-binding protein

3D Structure

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Related Domains

Browse other domains in SBP_bac_8 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_8(7523.1.1.28)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13416SBP_bac_8

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 7C1B RCSB PDB: 7C1B PDBe: 7C1B UniProt: Q5SLB4

Downloads

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