ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zm2A1 - ECOD Domain | ECOD

ECOD/Domains/e6zm2A1

e6zm2A1

UID: 002723980

PDB

Range: A:834-918
PDB: 6ZM2 chain A(all domains)
UniProt: G0SEG4 (all domains)
Gene: CTHT_0063660

Molecule: Putative mRNA splicing factor

3D Structure

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Related Domains

Browse other domains in OB_NTP_bind →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyOB_NTP_bind(2.1.1.37)

Ligands

in contact, ≤ 4 Å

(S)-propane-1,2-diolPGO
drugDrugBank DB04349
N-propanolPOL

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHER

Pfam Families

PF07717OB_NTP_bind

Oligonucleotide/oligosaccharide-binding (OB)-fold

ClanCL0021OB

External Links

ECOD PDB View: 6ZM2 RCSB PDB: 6ZM2 PDBe: 6ZM2 UniProt: G0SEG4

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.