ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zm2A3 - ECOD Domain | ECOD

ECOD/Domains/e6zm2A3

e6zm2A3

UID: 002723982

PDB

Range: A:651-833
PDB: 6ZM2 chain A(all domains)
UniProt: G0SEG4 (all domains)
Gene: CTHT_0063660

Molecule: Putative mRNA splicing factor

3D Structure

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Related Domains

Browse other domains in HA2_N,HA2_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSec63 N-terminal subdomain-like(4156)

HH-groupSec63 N-terminal subdomain-like(4156.1)

TT-groupSec63 N-terminal subdomain-like(4156.1.1)

FFamilyHA2_N,HA2_C(4156.1.1.2)

Ligands

in contact, ≤ 4 Å

(S)-propane-1,2-diolPGO
drugDrugBank DB04349
3[N-MORPHOLINO]PROPANE SULFONIC ACIDMPO
N-propanolPOL

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOL

Pfam Families

PF04408WHD_HA2

Helicase associated domain (HA2), winged-helix

ClanCL0123HTH

Helicase associated domain (HA2), ratchet-like

External Links

ECOD PDB View: 6ZM2 RCSB PDB: 6ZM2 PDBe: 6ZM2 UniProt: G0SEG4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.