ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7agcA2 - ECOD Domain | ECOD

ECOD/Domains/e7agcA2

e7agcA2

UID: 002725830

PDB

Range: A:182-339
PDB: 7AGC chain A(all domains)
UniProt: B8YPM3 (all domains)
Gene: SAPP1

Molecule: Candidapepsin

3D Structure

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Related Domains

Browse other domains in Asp →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyAsp(1.1.1.1)

Ligands

in contact, ≤ 4 Å

FormaldehydeFOR
drugDrugBank DB03843within 5 Å only

+ 2 additives (Triethylene glycol, DI(HYDROXYETHYL)ETHER)

Triethylene glycolPGE
DrugBank DB02327

Pfam Families

Eukaryotic aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 7AGC RCSB PDB: 7AGC PDBe: 7AGC UniProt: B8YPM3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.