ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e7jfpB2 - ECOD Domain | ECOD

ECOD/Domains/e7jfpB2

e7jfpB2

UID: 002729794

PDB

Range: B:1-245
PDB: 7JFP chain B(all domains)
UniProt: P53590 (all domains)
Gene: SUCLG2

Molecule: Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial

3D Structure

Loading viewer...

Related Domains

Browse other domains in ATP-grasp_2 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyATP-grasp_2(206.1.3.20)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Magnesium ionMG
metal

+ 1 additive (Glycerin)

Pfam Families

PF08442ATP-grasp_2

ATP-grasp domain

ClanCL0179ATP-grasp

External Links

ECOD PDB View: 7JFP RCSB PDB: 7JFP PDBe: 7JFP UniProt: P53590

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.