ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7o21B1 - ECOD Domain | ECOD

ECOD/Domains/e7o21B1

e7o21B1

UID: 002735158

PDB

Range: B:29-189
PDB: 7O21 chain B(all domains)
UniProt: Q6MNZ7 (all domains)
Gene: Bd1075

Molecule: Uncharacterized conserved

3D Structure

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Related Domains

Browse other domains in YkuD →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupL,D-transpeptidase catalytic domain-like(4091)

HH-groupL,D-transpeptidase catalytic domain-like(4091.1)

TT-groupL,D-transpeptidase catalytic domain-like(4091.1.1)

FFamilyYkuD(4091.1.1.1)

Ligands

in contact, ≤ 4 Å

Bromide ionBR

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

L,D-transpeptidase catalytic domain

ClanCL0508YkuD

External Links

ECOD PDB View: 7O21 RCSB PDB: 7O21 PDBe: 7O21 UniProt: Q6MNZ7

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.