ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xazA1 - ECOD Domain | ECOD

ECOD/Domains/e6xazA1

e6xazA1

UID: 002755855

PDB

Range: A:4-129
PDB: 6XAZ chain A(all domains)
UniProt: Q9NQX1 (all domains)
Gene: PRDM5

Molecule: PR domain zinc finger protein 5

3D Structure

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Related Domains

Browse other domains in PRDM2_PR →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupSET domain-like(70.3)

TT-groupSET domain-like(70.3.1)

FFamilyPRDM2_PR(70.3.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21549PRDM2_PR

PR domain zinc finger protein 2, PR domain

ClanCL0489SAF

External Links

ECOD PDB View: 6XAZ RCSB PDB: 6XAZ PDBe: 6XAZ UniProt: Q9NQX1

Downloads

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