ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ddqb1 - ECOD Domain | ECOD

ECOD/Domains/e7ddqb1

e7ddqb1

UID: 002760291

PDB

Range: b:2-54
PDB: 7DDQ chain b(all domains)

Molecule: Antenna pigment protein alpha chain

3D Structure

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Related Domains

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Classification

AArchitectureextended segments(a.20)

XX-groupBacterial light-harvesting complex subunits(5074)

HH-groupBacterial light-harvesting complex subunits(5074.1)

TT-groupBacterial light-harvesting complex subunits(5074.1.1)

FFamilyLHC(5074.1.1.1)

Ligands

in contact, ≤ 4 Å

Bacteriochlorophyll ABCL
drugDrugBank DB01853
UbidecarenoneU10
drugDrugBank DB09270
1,2-Distearoyl-sn-glycerophosphoethanolamine

Pfam Families

Antenna complex alpha/beta subunit

External Links

ECOD PDB View: 7DDQ RCSB PDB: 7DDQ PDBe: 7DDQ

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

SpheroideneSPO

Shown in the structure viewer. Drug annotations from DrugDomain.