ECODEvolutionary Classification of Protein Domains

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PDB 7DDQ

ELECTRON MICROSCOPY34 chains35 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain aAntenna pigment protein alpha chainview chain

1 domain

e7ddqa1(a:2-45)

Chain AAntenna pigment protein beta chainview chain

1 domain

e7ddqA1(A:5-48)

Chain bAntenna pigment protein alpha chainview chain

1 domain

e7ddqb1(b:2-54)

Chain BAntenna pigment protein beta chainview chain

1 domain

e7ddqB1(B:5-48)

Chain dAntenna pigment protein alpha chainview chain

1 domain

e7ddqd1(d:2-54)

Chain DAntenna pigment protein beta chainview chain

1 domain

e7ddqD1(D:5-48)

Chain eAntenna pigment protein alpha chainview chain

1 domain

e7ddqe1(e:2-54)

Chain EAntenna pigment protein beta chainview chain

1 domain

e7ddqE1(E:5-48)

Chain fAntenna pigment protein alpha chainview chain

1 domain

e7ddqf1(f:2-54)

Chain FAntenna pigment protein beta chainview chain

1 domain

e7ddqF1(F:5-48)

Chain gAntenna pigment protein alpha chainview chain

1 domain

e7ddqg1(g:2-54)

Chain GAntenna pigment protein beta chainview chain

1 domain

e7ddqG1(G:5-48)

Chain HPhotosynthetic reaction center subunit Hview chain

2 domains

e7ddqH1(H:1-35)e7ddqH2(H:36-250)

Chain iAntenna pigment protein alpha chainview chain

1 domain

e7ddqi1(i:2-54)

Chain IAntenna pigment protein beta chainview chain

1 domain

e7ddqI1(I:5-48)

Chain jAntenna pigment protein alpha chainview chain

1 domain

e7ddqj1(j:2-54)

Chain JAntenna pigment protein beta chainview chain

1 domain

e7ddqJ1(J:5-48)

Chain kAntenna pigment protein alpha chainview chain

1 domain

e7ddqk1(k:2-54)

Chain KAntenna pigment protein beta chainview chain

1 domain

e7ddqK1(K:5-48)

Chain LPhotosynthetic reaction center L subunitview chain

1 domain

e7ddqL1(L:2-276)

Chain MReaction center protein M chainview chain

1 domain

e7ddqM1(M:3-307)

Chain nAntenna pigment protein alpha chainview chain

1 domain

e7ddqn1(n:2-54)

Chain NAntenna pigment protein beta chainview chain

1 domain

e7ddqN1(N:5-48)

Chain oAntenna pigment protein alpha chainview chain

1 domain

e7ddqo1(o:2-54)

Chain OAntenna pigment protein beta chainview chain

1 domain

e7ddqO1(O:5-48)

Chain rAntenna pigment protein alpha chainview chain

1 domain

e7ddqr1(r:2-54)

Chain RAntenna pigment protein beta chainview chain

1 domain

e7ddqR1(R:5-48)

Chain sAntenna pigment protein alpha chainview chain

1 domain

e7ddqs1(s:2-54)

Chain SAntenna pigment protein beta chainview chain

1 domain

e7ddqS1(S:5-48)

Chain tAntenna pigment protein alpha chainview chain

1 domain

e7ddqt1(t:2-54)

Chain TAntenna pigment protein beta chainview chain

1 domain

e7ddqT1(T:5-47)

Chain uAntenna pigment protein alpha chainview chain

1 domain

e7ddqu1(u:3-54)

Chain UAntenna pigment protein beta chainview chain

1 domain

e7ddqU1(U:5-47)

Chain XPufXview chain

1 domain

e7ddqX1(X:2-82)

All Domains (35)

#	Chain	Domain ID	Range	Family	Classification
1	a	e7ddqa1	a:2-45	LHC	5074 → 5074.1 → 5074.1.1
2	A	e7ddqA1	A:5-48	LHC	5074 → 5074.1 → 5074.1.1
3	b	e7ddqb1	b:2-54	LHC	5074 → 5074.1 → 5074.1.1
4	B	e7ddqB1	B:5-48	LHC	5074 → 5074.1 → 5074.1.1
5	d	e7ddqd1	d:2-54	LHC	5074 → 5074.1 → 5074.1.1
6	D	e7ddqD1	D:5-48	LHC	5074 → 5074.1 → 5074.1.1
7	e	e7ddqe1	e:2-54	LHC	5074 → 5074.1 → 5074.1.1
8	E	e7ddqE1	E:5-48	LHC	5074 → 5074.1 → 5074.1.1
9	f	e7ddqf1	f:2-54	LHC	5074 → 5074.1 → 5074.1.1
10	F	e7ddqF1	F:5-48	LHC	5074 → 5074.1 → 5074.1.1
11	g	e7ddqg1	g:2-54	LHC	5074 → 5074.1 → 5074.1.1
12	G	e7ddqG1	G:5-48	LHC	5074 → 5074.1 → 5074.1.1
13	H	e7ddqH1	H:1-35	PRCH	5002 → 5002.1 → 5002.1.1
14	H	e7ddqH2	H:36-250	Photosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain	4 → 4.6 → 4.6.1
15	i	e7ddqi1	i:2-54	LHC	5074 → 5074.1 → 5074.1.1
16	I	e7ddqI1	I:5-48	LHC	5074 → 5074.1 → 5074.1.1
17	j	e7ddqj1	j:2-54	LHC	5074 → 5074.1 → 5074.1.1
18	J	e7ddqJ1	J:5-48	LHC	5074 → 5074.1 → 5074.1.1
19	k	e7ddqk1	k:2-54	LHC	5074 → 5074.1 → 5074.1.1
20	K	e7ddqK1	K:5-48	LHC	5074 → 5074.1 → 5074.1.1
21	L	e7ddqL1	L:2-276	Photo_RC	5037 → 5037.1 → 5037.1.1
22	M	e7ddqM1	M:3-307	Photo_RC	5037 → 5037.1 → 5037.1.1
23	n	e7ddqn1	n:2-54	LHC	5074 → 5074.1 → 5074.1.1
24	N	e7ddqN1	N:5-48	LHC	5074 → 5074.1 → 5074.1.1
25	o	e7ddqo1	o:2-54	LHC	5074 → 5074.1 → 5074.1.1
26	O	e7ddqO1	O:5-48	LHC	5074 → 5074.1 → 5074.1.1
27	r	e7ddqr1	r:2-54	LHC	5074 → 5074.1 → 5074.1.1
28	R	e7ddqR1	R:5-48	LHC	5074 → 5074.1 → 5074.1.1
29	s	e7ddqs1	s:2-54	LHC	5074 → 5074.1 → 5074.1.1
30	S	e7ddqS1	S:5-48	LHC	5074 → 5074.1 → 5074.1.1
31	t	e7ddqt1	t:2-54	LHC	5074 → 5074.1 → 5074.1.1
32	T	e7ddqT1	T:5-47	LHC	5074 → 5074.1 → 5074.1.1
33	u	e7ddqu1	u:3-54	LHC	5074 → 5074.1 → 5074.1.1
34	U	e7ddqU1	U:5-47	LHC	5074 → 5074.1 → 5074.1.1
35	X	e7ddqX1	X:2-82	RhodobacterPufX	6014 → 6014.1 → 6014.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors