ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6yx7HHH1 - ECOD Domain | ECOD

ECOD/Domains/e6yx7HHH1

e6yx7HHH1

UID: 002768397

PDB

Range: HHH:1-161
PDB: 6YX7 chain HHH(all domains)

Molecule: Allophycocyanin beta

3D Structure

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Related Domains

Browse other domains in Phycobilisome →

Classification

AArchitecturealpha arrays(a.6)

XX-groupGlobin-like(106)

HH-groupGlobin-like(106.1)

TT-groupGlobin-like(106.1.1)

FFamilyPhycobilisome(106.1.1.2)

Ligands

in contact, ≤ 4 Å

Glutamic acidGLU
drugDrugBank DB00142
GlycineGLY
drugDrugBank DB00145within 5 Å only

Pfam Families

PF00502Phycobilisome

Phycobilisome protein

ClanCL0090Globin

External Links

ECOD PDB View: 6YX7 RCSB PDB: 6YX7 PDBe: 6YX7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phycocyanobilin

+ 2 additives ((4r)-2-Methylpentane-2,4-Diol, DI(HYDROXYETHYL)ETHER)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.