ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1y89B1 - ECOD Domain | ECOD

ECOD/Domains/e1y89B1

e1y89B1

UID: 000277737

PDB

Range: B:1-238
PDB: 1Y89 chain B(all domains)
UniProt: Q9KL51 (all domains)
Gene: pgl

Molecule: devB protein

3D Structure

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Related Domains

Browse other domains in Glucosamine_iso →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNagB/RpiA/CoA transferase-like(2003.1.7)

FFamilyGlucosamine_iso(2003.1.7.4)

Ligands

in contact, ≤ 4 Å

2-(2-{2-[2-(2-{2-[2-(2-Ethoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethanol, Polyethyleneglycol Peg400PE5
drugDrugBank DB03556

+ 3 additives (Phosphate ion, Nonaethylene glycol, DI(HYDROXYETHYL)ETHER)

Phosphate ionPO4

Pfam Families

PF01182Glucosamine_iso

Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1Y89 RCSB PDB: 1Y89 PDBe: 1Y89 UniProt: Q9KL51

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

Nonaethylene glycol2PE

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.