ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ybxB1 - ECOD Domain | ECOD

ECOD/Domains/e1ybxB1

e1ybxB1

UID: 000278047

PDB

Range: B:12-103
PDB: 1YBX chain B(all domains)
UniProt: A3DHB8 (all domains)
Gene: Cthe_2143

Molecule: Conserved hypothetical protein

3D Structure

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Related Domains

Browse other domains in YbaB_DNA_bd →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibonuclease PH domain 2-like(245)

HH-groupYbaB(245.2)

TT-groupYbaB(245.2.1)

FFamilyYbaB_DNA_bd(245.2.1.1)

Ligands

in contact, ≤ 4 Å

Unknown atom or ionUNX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02575YbaB_DNA_bd

YbaB/EbfC DNA-binding family

ClanCL0717YbaB

External Links

ECOD PDB View: 1YBX RCSB PDB: 1YBX PDBe: 1YBX UniProt: A3DHB8

Downloads

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